BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003C04SP1|AL425089
(1013 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig719 1928 0.0
>3x_Contig719
Length = 1833
Score = 1928 bits (967), Expect = 0.0
Identities = 995/1007 (98%), Gaps = 2/1007 (0%)
Strand = Plus / Plus
Query: 3 cctcacgaactaaagacggaaataaagagtacctctcattcattcattccatacttcaat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctcacgaactaaagacggaaataaagagtacctctcattcattcattccatacttcaat 379
Query: 63 tctcaatgactaaccacttttatcattcattaatatattacgttttccatttccttttgc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctcaatgactaaccacttttatcattcattaatatattacgttttccatttccttttgc 439
Query: 123 actttttcaattccaactagctcttacgtttccacctttgctacataatttattgtatat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 actttttcaattccaactagctcttacgtttccacctttgctacataatttattgtatat 499
Query: 183 ttaccccactgtttttacccgcaccatgggcaccctcaattatagtctgttctttcagaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttaccccactgtttttacccgcaccatgggcaccctcaattatagtctgttctttcagaa 559
Query: 243 tctgacacatctctcatctgatcttaattcgacttgcttacattgaaaactgaatctcaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctgacacatctctcatctgatcttaattcgacttgcttacattgaaaactgaatctcaa 619
Query: 303 ttgacttcttacgaggtacgatcgttcatcgacgtgggaagcaacgcttttggragcatg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 620 ttgacttcttacgaggtacgatcgttcatcgacgtgggaagcaacgcttttggaagcatg 679
Query: 363 atacgtctcaaacgattgtgttagtraccaatccctcctcatttgggtatgtgggatata 422
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 680 atacgtctcaaacgattgtgttagtaaccaatccctcctcatttgggtatgtgggatata 739
Query: 423 caaagaatggttcttatgactatattatttttggragcacgtgatcatcattttcttttt 482
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 740 caaagaatggttcttatgactatattatttttggaagcacgtgatcatcattttcttttt 799
Query: 483 cgttccttatcctttaaagtatgggcaggatttccttggaaacgagaaatccaactgtta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cgttccttatcctttaaagtatgggcaggatttccttggaaacgagaaatccaactgtta 859
Query: 543 tcacaactacaatccaaagggaggggtaaaaggaccaaatggacaaaacaaagtaaagat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tcacaactacaatccaaagggaggggtaaaaggaccaaatggacaaaacaaagtaaagat 919
Query: 603 atccagaataacactttaaacaatgtctaatacgacaccatggcagtatacaagtacggg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 atccagaataacactttaaacaatgtctaatacgacaccatggcagtatacaagtacggg 979
Query: 663 gtctccgcagactccaagtgcagtgagtgcgaatttatttggaaatagtatgagtmtaag 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 980 gtctccgcagactccaagtgcagtgagtgcgaatttatttggaaatagtatgagtctaag 1039
Query: 723 ttcaacaagcagtacaagcagttcaagcgttgggaataataacaagagtagtatgtcatc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 ttcaacaagcagtacaagcagttcaagcgttgggaataataacaagagtagtatgtcatc 1099
Query: 783 tggccagaatattggcatgctgggaccggctcctggtatgctgaatatgaacatacctat 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 tggccagaatattggcatgctgggaccggctcctggtatgctgaatatgaacatacctat 1159
Query: 843 gggtgttgattctacgtmcaggctgggatctggagcaggaactggagtmggatctttgat 902
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1160 gggtgttgattctacgtccaggctgggatctggagcaggaactggagtcggatctttgat 1219
Query: 903 gtacagttt-mctcaggaatcgcttctcagtaagaatatgagcaaatcgttcgaggacga 961
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 gtacagtttacctcaggaatcgcttctcagtaagaatatgagcaaatcgttcgaggacga 1279
Query: 962 tttattcttttgktccaggtcattattatctaagg-agagctttcgc 1007
|||||||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 1280 tttattcttttgtccaaggtcattattatctaaggaagagctttcgc 1326
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7057
Number of Sequences: 1807
Number of extensions: 7057
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 1013
length of database: 10,358,551
effective HSP length: 16
effective length of query: 997
effective length of database: 10,329,639
effective search space: 10298650083
effective search space used: 10298650083
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)